Genomes To Fields (G2F) Publications

Symbol Legend: * Authors contributed equally to the article

doi:10.3389/fgene.2020.592769

Utility of Climatic Information via Combining Ability Models to Improve Genomic Prediction for Yield within the Genomes to Fields Maize Project

Diego Jarquin, Natalia de Leon, Cinta Romay, Martin Bohn, Edward S. Buckler, Ignacio Ciampitti, Jode Edwards, David Ertl, Sherry Flint-Garcia, Michael A. Gore, Christopher Graham, Candice N. Hirsch, James B. Holland, David Hooker, Shawn M. Kaeppler, Joseph Knoll, Elizabeth C. Lee, Carolyn J. Lawrence-Dill, Jonathan P. Lynch, Stephen P. Moose, Seth C. Murray, Rebecca Nelson, Torbert Rocheford, James C. Schnable, Patrick S. Schnable, Margaret Smith, Nathan Springer, Peter Thomison, Mitch Tuinstra, Randall J. Wisser, Wenwei Xu, Jianming Yu, Aaron Lorenz

doi:10.1093/g3journal/jkaa050

The Importance of Dominance and Genotype-by-Environment Interactions on Grain Yield Variation in a Large-Scale Public Cooperative Maize Experiment

Anna R. Rogers, Jeffrey C. Dunne, Cinta Romay, Martin Bohn, Edward S. Buckler, Ignacio A. Ciampitti, Jode Edwards, David Ertl, Sherry Flint-Garcia, Michael A. Gore, Christopher Graham, Candice N. Hirsch, Elizabeth Hood, David C. Hooker, Joseph Knoll, Elizabeth C. Lee, Aaron Lorenz, Jonathan P. Lynch, John McKay, Stephen P. Moose, Seth C. Murray, Rebecca Nelson, Torbert Rocheford, James C. Schnable, Patrick S. Schnable, Rajandeep Sekhon, Maninder Singh, Margaret Smith, Nathan Springer, Kurt Thelen, Peter Thomison, Addie Thompson, Mitch Tuinstra, Jason Wallace, Randall J. Wisser, Wenwei Xu, A. R. Gilmour, Shawn M. Kaeppler, Natalia De Leon, James B. Holland

doi:10.1007/s00122-020-03637-6

Temporal covariance structure of multi-spectral phenotypes and their predictive ability for end-of-season traits in maize

Mahlet T. Anche, Nicholas S. Kaczmar, Nicolas Morales, James W. Clohessy, Daniel C. Ilut, Michael A. Gore, Kelly R. Robbins

doi:10.1002/ppj2.20004

ImageBreed: Open‐access plant breeding web–database for image‐based phenotyping

Nicolas Morales, Nicholas S. Kaczmar, Nicholas Santantonio, Michael A. Gore, Lukas A. Mueller, Kelly R. Robbins

doi:10.1016/j.fcr.2020.107737

Stalk bending strength is strongly associated with maize stalk lodging incidence across multiple environments

Rajandeep S. Sekhon, Chase N. Joyner, Arlyn J. Ackerman, Christopher S. McMahan, Douglas D. Cook, Daniel J. Robertson

doi:10.1186/s13104-020-4922-8

Maize genomes to fields (G2F): 2014–2017 field seasons: genotype, phenotype, climatic, soil, and inbred ear image datasets

Bridget A. McFarland*, Naser AlKhalifah*, Martin Bohn, Jessica Bubert, Edward S. Buckler, Ignacio Ciampitti, Jode Edwards, David Ertl, Joseph L. Gage, Celeste M. Falcon, Sherry Flint-Garcia, Michael A. Gore, Christopher Graham, Candice N. Hirsch, James B. Holland, Elizabeth Hood, David Hooker, Diego Jarquin, Shawn M. Kaeppler, Joseph Knoll, Greg Kruger, Nick Lauter, Elizabeth C. Lee, Dayane C. Lima, Aaron Lorenz, Jonathan P. Lynch, John McKay, Nathan D. Miller, Stephen P. Moose, Seth C. Murray, Rebecca Nelson, Christina Poudyal, Torbert Rocheford, Oscar Rodriguez, Maria Cinta Romay, James C. Schnable, Patrick S. Schnable, Brian Scully, Rajandeep Sekhon, Kevin Silverstein, Maninder Singh, Margaret Smith, Edgar P. Spalding, Nathan Springer, Kurt Thelen, Peter Thomison, Mitchell Tuinstra, Jason Wallace, Ramona Walls, David Wills, Randall J. Wisser, Wenwei Xu, Cheng-Ting Yeh, Natalia de Leon

doi:10.2135/cropsci2019.05.0294

Relative utility of agronomic, phenological, and morphological traits for assessing genotype-by-environment interaction in maize inbreds

Celeste M. Falcon, Shawn M. Kaeppler, Edgar P. Spalding, Nathan D. Miller, Nicholas Haase, Naser AlKhalifah, Martin Bohn, Edward S. Buckler, Darwin A. Campbell, Ignacio Ciampitti, Lisa Coffey, Jode Edwards, David Ertl, Sherry Flint-Garcia, Michael A. Gore, Christopher Graham, Candice N. Hirsch, James B. Holland, Diego Jarquín, Joseph Knoll, Nick Lauter, Carolyn J. Lawrence-Dill, Elizabeth C. Lee, Aaron Lorenz, Jonathan P. Lynch, Seth C. Murray, Rebecca Nelson, Cinta M. Romay, Torbert Rocheford, Patrick S. Schnable, Brian Scully, Margaret Smith, Nathan Springer, Mitch Tuinstra, Renee Walton, Teclemariam Weldekidan, Randall J. Wisser, Wenwei Xu, Natalia de Leon

doi:10.3389/fpls.2019.01550

Millimeter-Level Plant Disease Detection From Aerial Photographs via Deep Learning and Crowdsourced Data

Tyr Wiesner-Hanks, Harvey Wu, Ethan Stewart, Chad DeChant, Nicholas Kaczmar, Hod Lipson, Michael A. Gore, Rebecca J. Nelson

doi:10.2135/tppj2019.07.0011

In-Field whole-plant maize architecture characterized by subcanopy rovers and latent space phenotyping

Joseph L. Gage, Elliot Richards, Nicholas Lepak, Nicholas Kaczmar, Chinmay Soman, Girish Chowdhary, Michael A. Gore, Edward S. Buckler

doi:10.2135/tppj2019.03.0006

Autonomous detection of plant disease symptoms directly from aerial imagery

Harvey Wu, Tyr Wiesner-Hanks, Ethan L. Stewart, Chad DeChant, Nicholas Kaczmar, Michael A. Gore, Rebecca J. Nelson, Hod Lipson

doi:10.3390/rs11192209

Quantitative phenotyping of northern leaf blight in uav images using deep learning

Ethan L. Stewart, Tyr Wiesner-Hanks, Nicholas Kaczmar, Chad DeChant, Harvey Wu, Hod Lipson, Rebecca J. Nelson, Michael A. Gore

doi:10.2135/tppj2019.02.0004

Prediction of maize grain yield before maturity using improved temporal height estimates of unmanned aerial systems

Steven L. Anderson, Seth C. Murray, Lonesome Malambo, Colby Ratcliff, Sorin Popescu, Dale Cope, Anjin Chang, Jinha Jung, J. Alex Thomasson

doi:10.2135/cropsci2019.02.0071

Idea factory: the maize genomes to fields initiative

Carolyn J. Lawrence-Dill, Patrick S. Schnable, Nathan M. Springer

doi:10.1145/3233547.3233593

Detecting divergent subpopulations in phenomics data using interesting flares

Methun Kamruzzaman, Ananth Kalyanaraman, Bala Krishnamoorthy

doi:10.1186/s13104-018-3508-1

Maize genomes to fields: 2014 and 2015 field season genotype, phenotype, environment, and inbred ear image datasets

Naser AlKhalifah*, Darwin A. Campbell*, Celeste M. Falcon*, Jack M. Gardiner*, Nathan D. Miller*, Maria Cinta Romay*, Ramona Walls*, Renee Walton*, Cheng-Ting Yeh*, Martin Bohn, Jessica Bubert, Edward S. Buckler, Ignacio Ciampitti, Sherry Flint-Garcia, Michael A. Gore, Christopher Graham, Candice Hirsch, James B. Holland, David Hooker, Shawn Kaeppler, Joseph Knoll, Nick Lauter, Elizabeth C. Lee, Aaron Lorenz, Jonathan P. Lynch, Stephen P. Moose, Seth C. Murray, Rebecca Nelson, Torbert Rocheford, Oscar Rodriguez, James C. Schnable, Brian Scully, Margaret Smith, Nathan Springer, Peter Thomison, Mitchell Tuinstra, Randall J. Wisser, Wenwei Xu, David Ertl, Patrick S. Schnable, Natalia De Leon, Edgar P. Spalding, Jode Edwards, Carolyn J. Lawrence-Dill

doi:10.1186/s13104-018-3548-6

Image set for deep learning: field images of maize annotated with disease symptoms

Tyr Wiesner-Hanks, Ethan L. Stewart, Nicholas Kaczmar, Chad DeChant, Harvey Wu, Rebecca J. Nelson, Hod Lipson, Michael A. Gore

2018 NIFA FACT workshop: high throughput, field-based phenotyping technologies for the genomes to fields (G2F) initiative

Carolyn J. Lawrence-Dill, Patrick Schnable, Nathan Springer, and: Natalia De Leon, Jode Edwards, David Ertl, Shawn Kaeppler, Nick Lauter, John McKay, Francisco Munoz-Arriola, Seth Murray, Duke Pauli, Nathalia Penna Cruzato, Colby Ratcliff, James Schnable, Kevin Silverstein, Edgar P. Spalding, Addie Thompson, Ruth Wagner, Jason Wallace, Justin Walley, Jianming Yu.

doi:10.1038/s41467-017-01450-2

The effect of artificial selection on phenotypic plasticity in maize

Joseph L. Gage, Diego Jarquin, Cinta Romay, Aaron Lorenz, Edward S. Buckler, Shawn Kaeppler, Naser Alkhalifah, Martin Bohn, Darwin A. Campbell, Jode Edwards, David Ertl, Sherry Flint-Garcia, Jack Gardiner, Byron Good, Candice N. Hirsch, Jim Holland, David C. Hooker, Joseph Knoll, Judith Kolkman, Greg Kruger, Nick Lauter, Carolyn J. Lawrence-Dill, Elizabeth Lee, Jonathan Lynch, Seth C. Murray, Rebecca Nelson, Jane Petzoldt, Torbert Rocheford, James Schnable, Patrick S. Schnable, Brian Scully, Margaret Smith, Nathan M. Springer, Srikant Srinivasan, Renee Walton, Teclemariam Weldekidan, Randall J. Wisser, Wenwei Xu, Jianming Yu, Natalia de Leon

doi:10.1094/PHYTO-11-16-0417-R

Automated identification of northern leaf blight-infected maize plants from field imagery using deep learning

Chad DeChant, Tyr Wiesner-Hanks, Siyuan Chen, Ethan L. Stewart, Jason Yosinski, Michael A. Gore, Rebecca J. Nelson, Hod Lipson